Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Central tail fiber j | AO275_20500 | Not Available | Negative | 2183162 - 2186857 | 132824.0 |
| Tail assembly protein | AO275_20505 | Not Available | Negative | 2186915 - 2187502 | 20683.3 |
| hypothetical protein | AO275_20510 | Not Available | Negative | 2187557 - 2187904 | 12415.0 |
| Hypothetical protein | AO275_20515 | Not Available | Negative | 2188354 - 2188740 | 14078.1 |
| Minor tail protein | AO275_20520 | Not Available | Negative | 2189206 - 2189985 | 29102.3 |
| Minor tail protein l | AO275_20525 | Not Available | Negative | 2189988 - 2190737 | 26820.2 |
| Minor tail protein m | AO275_20530 | Not Available | Negative | 2190747 - 2191085 | 12510.9 |
| Putative tail length tape-measure protein | AO275_20535 | Not Available | Negative | 2191088 - 2194579 | 119731.0 |
| Hypothetical protein | AO275_20540 | Not Available | Negative | 2194590 - 2194838 | 9099.88 |
| Hypothetical protein | AO275_20545 | Not Available | Negative | 2194901 - 2195284 | 14169.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
