Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | AO275_09290 | Not Available | Positive | 3371151 - 3371582 | 15572.6 |
| udp-glucose 6-dehydrogenase | AO275_09295 | Not Available | Positive | 3371560 - 3372954 | 51794.0 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | AO275_09300 | Not Available | Negative | 3372957 - 3374435 | 55120.9 |
| nuclease | AO275_09305 | Not Available | Positive | 3374737 - 3375372 | 24498.9 |
| hypothetical protein | AO275_09310 | Not Available | Positive | 3375491 - 3376558 | 39053.2 |
| asnc family transcriptional regulator | AO275_09315 | Not Available | Positive | 3376709 - 3377182 | 16979.5 |
| amine oxidase | AO275_09320 | Not Available | Positive | 3377335 - 3379014 | 62356.5 |
| carbon-nitrogen hydrolase | AO275_09325 | Not Available | Positive | 3379030 - 3379821 | 29258.8 |
| peptidase m16 | AO275_09330 | Not Available | Positive | 3379958 - 3382324 | 86733.1 |
| pyrroloquinoline quinone biosynthesis protein pqqb | AO275_09335 | Not Available | Positive | 3382617 - 3383528 | 33384.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
