Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_09190 | Not Available | Negative | 3349646 - 3350080 | 16169.3 |
| methylmalonyl-coa epimerase | AO275_09195 | Not Available | Positive | 3350200 - 3350655 | 16977.4 |
| chemotaxis protein | AO275_09200 | Not Available | Positive | 3350927 - 3352144 | 43498.7 |
| chemotaxis protein chey | AO275_09205 | Not Available | Positive | 3352154 - 3352522 | 12990.0 |
| sulfate transporter | AO275_09210 | Not Available | Positive | 3352546 - 3352836 | 10101.2 |
| chemotaxis protein chea | AO275_09215 | Not Available | Positive | 3352879 - 3354963 | 75043.5 |
| chemotaxis protein | AO275_09220 | Not Available | Positive | 3354994 - 3356652 | 59418.2 |
| chemotaxis protein chew | AO275_09225 | Not Available | Positive | 3356689 - 3357228 | 19192.3 |
| sam-dependent methyltransferase | AO275_09230 | Not Available | Positive | 3357238 - 3358047 | 30452.8 |
| chemotaxis protein ched | AO275_09235 | Not Available | Positive | 3358044 - 3358577 | 19931.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
