Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AO275_08980 | Not Available | Negative | 3301872 - 3303887 | 74953.6 |
| hydrolase or acyltransferase | AO275_08985 | Not Available | Positive | 3303988 - 3304953 | 34589.1 |
| molecular chaperone dnaj | AO275_08990 | Not Available | Negative | 3305122 - 3305889 | 28219.3 |
| mannose-1-phosphate guanylyltransferase | AO275_08995 | Not Available | Negative | 3305886 - 3306560 | 24541.3 |
| aminoglycoside phosphotransferase | AO275_09000 | Not Available | Negative | 3306602 - 3307627 | 38784.4 |
| lps biosynthesis protein | AO275_09005 | Not Available | Positive | 3307757 - 3310561 | 105552.0 |
| molecular chaperone sura | AO275_09010 | Not Available | Positive | 3310542 - 3311864 | 48723.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | AO275_09015 | Not Available | Positive | 3311861 - 3312850 | 34940.3 |
| rrna methyltransferase | AO275_09020 | Not Available | Positive | 3312847 - 3313653 | 29799.1 |
| magnesium transporter apag | AO275_09025 | Not Available | Positive | 3313770 - 3314150 | 13823.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
