Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | AO275_08930 | Not Available | Positive | 3290948 - 3291190 | 9027.83 |
| esterase | AO275_08935 | Not Available | Positive | 3291305 - 3293236 | 69421.4 |
| anthranilate synthase | AO275_08940 | Not Available | Negative | 3293320 - 3294801 | 54662.7 |
| phosphoglycolate phosphatase | AO275_08945 | Not Available | Negative | 3294871 - 3295689 | 30188.0 |
| ribulose phosphate epimerase | AO275_08950 | Not Available | Negative | 3295686 - 3296360 | 24261.3 |
| polyamine abc transporter permease | AO275_08955 | Not Available | Negative | 3296533 - 3297357 | 29476.0 |
| polyamine abc transporter substrate-binding protein | AO275_08960 | Not Available | Negative | 3297369 - 3298616 | 45933.0 |
| spermidine/putrescine abc transporter substrate-binding protein | AO275_08965 | Not Available | Negative | 3298695 - 3299729 | 37598.6 |
| spermidine/putrescine abc transporter atp-binding protein | AO275_08970 | Not Available | Negative | 3299812 - 3300936 | 41192.7 |
| transcriptional regulator | AO275_08975 | Not Available | Negative | 3301246 - 3301875 | 22835.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
