Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 3254660 - 3254736 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 3254754 - 3254830 | Not Available |
| threonine dehydratase | AO275_00010 | Not Available | Positive | 3257340 - 3257551 | 7600.31 |
| tyrosine--trna ligase | AO275_08730 | Not Available | Negative | 3258179 - 3259390 | 44444.7 |
| peptidase m23 | AO275_08735 | Not Available | Positive | 3259594 - 3261021 | 51655.3 |
| anhydro-n-acetylmuramic acid kinase | AO275_08740 | Not Available | Positive | 3261025 - 3262119 | 39337.1 |
| iron-sulfur cluster insertion protein erpa | AO275_08745 | Not Available | Negative | 3262182 - 3262532 | 12448.4 |
| n-acetyl-gamma-glutamyl-phosphate reductase | AO275_08750 | Not Available | Negative | 3262668 - 3263702 | 36593.1 |
| hypothetical protein | AO275_08755 | Not Available | Positive | 3263836 - 3264264 | 16575.0 |
| hypothetical protein | AO275_08760 | Not Available | Positive | 3264369 - 3265268 | 32302.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
