Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | AO275_25010 | Not Available | Negative | 3233241 - 3234461 | 45036.3 |
| glycosyl transferase family 1 | AO275_25015 | Not Available | Negative | 3234535 - 3235650 | 41484.3 |
| hypothetical protein | AO275_25020 | Not Available | Negative | 3235669 - 3237045 | 52379.3 |
| glycosyl transferase family 1 | AO275_25025 | Not Available | Negative | 3237135 - 3238385 | 46344.9 |
| glycosyl transferase family 2 | AO275_25030 | Not Available | Negative | 3238382 - 3239383 | 37663.0 |
| transcriptional regulator | AO275_25035 | Not Available | Negative | 3239485 - 3239997 | 19769.0 |
| hypothetical protein | AO275_25040 | Not Available | Negative | 3240002 - 3240790 | 29754.2 |
| tyrosine protein kinase | AO275_25045 | Not Available | Negative | 3240835 - 3243051 | 81945.6 |
| phosphotyrosine protein phosphatase | AO275_25050 | Not Available | Negative | 3243052 - 3243504 | 16996.8 |
| glycosyl transferase family 2 | AO275_25055 | Not Available | Negative | 3243494 - 3244435 | 35574.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
