Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | AO275_24960 | Not Available | Positive | 3223946 - 3224437 | 18021.7 |
| short chain fatty acid transporter | AO275_24965 | Not Available | Negative | 3224454 - 3225872 | 50701.6 |
| succinyl-coa--3-ketoacid-coa transferase | AO275_24970 | Not Available | Negative | 3226116 - 3226772 | 23179.2 |
| succinyl-coa--3-ketoacid-coa transferase | AO275_24975 | Not Available | Negative | 3226832 - 3227533 | 25281.6 |
| lysr family transcriptional regulator | AO275_24980 | Not Available | Positive | 3227660 - 3228553 | 33000.1 |
| hypothetical protein | AO275_24985 | Not Available | Positive | 3228652 - 3228933 | 10458.3 |
| lysine transporter lyse | AO275_24990 | Not Available | Positive | 3229067 - 3229675 | 21727.2 |
| nadph-dependent fmn reductase | AO275_24995 | Not Available | Negative | 3229740 - 3230321 | 20825.2 |
| capsular biosynthesis protein | AO275_25000 | Not Available | Negative | 3230567 - 3231655 | 39082.7 |
| undecaprenyl-phosphate glucose phosphotransferase | AO275_25005 | Not Available | Negative | 3231819 - 3233228 | 53627.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
