Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | AO275_24860 | Not Available | Negative | 3200040 - 3201725 | 59904.6 |
| cation:proton antiporter | AO275_24865 | Not Available | Negative | 3201722 - 3202066 | 12290.5 |
| cation:proton antiporter | AO275_24870 | Not Available | Negative | 3202066 - 3204984 | 105668.0 |
| hypothetical protein | AO275_24875 | Not Available | Negative | 3205142 - 3206065 | 32399.9 |
| cro/cl family transcriptional regulator | AO275_24880 | Not Available | Positive | 3206171 - 3206740 | 21090.9 |
| pyridine nucleotide-disulfide oxidoreductase | AO275_24885 | Not Available | Positive | 3206786 - 3208192 | 51189.3 |
| merr family transcriptional regulator | AO275_24890 | Not Available | Negative | 3208205 - 3208666 | 16903.5 |
| hypothetical protein | AO275_24895 | Not Available | Positive | 3208753 - 3209088 | 12576.0 |
| fis family transcriptional regulator | AO275_24900 | Not Available | Negative | 3209101 - 3210201 | 41087.5 |
| alkanesulfonate monooxygenase | AO275_24905 | Not Available | Negative | 3210207 - 3211346 | 41499.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
