Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-glycerol--udp-pyrophosphoryl-n- acetylglucosaminyl-n-acetylmannosamine glycerophosphotransferase | AO275_24710 | Not Available | Negative | 3169261 - 3169731 | 17326.8 |
| lexa family transcriptional regulator | AO275_24715 | Not Available | Negative | 3169741 - 3170349 | 22165.9 |
| tetr family transcriptional regulator | AO275_24720 | Not Available | Positive | 3170620 - 3171339 | 26564.4 |
| beta-hexosaminidase | AO275_24725 | Not Available | Positive | 3171430 - 3172440 | 36537.0 |
| 5'-methylthioadenosine phosphorylase | AO275_24730 | Not Available | Positive | 3172450 - 3173190 | 26514.9 |
| cytochrome b | AO275_24735 | Not Available | Negative | 3173247 - 3173786 | 20484.4 |
| hypothetical protein | AO275_24740 | Not Available | Negative | 3173965 - 3174429 | 16988.0 |
| hypothetical protein | AO275_24745 | Not Available | Positive | 3174616 - 3175401 | 29186.8 |
| cardiolipin synthase 2 | AO275_24750 | Not Available | Positive | 3175398 - 3176660 | 47627.7 |
| hypothetical protein | AO275_24755 | Not Available | Positive | 3176657 - 3177667 | 37692.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
