Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | AO275_24610 | Not Available | Negative | 3146006 - 3146782 | 27508.2 |
| mannose-1-phosphate guanylyltransferase | AO275_24615 | Not Available | Negative | 3146936 - 3148393 | 53773.4 |
| undecaprenyl-phosphate glucose phosphotransferase | AO275_24620 | Not Available | Negative | 3148393 - 3149829 | 54424.2 |
| lipid kinase | AO275_24625 | Not Available | Positive | 3150347 - 3151276 | 32839.2 |
| luxr family transcriptional regulator | AO275_24630 | Not Available | Negative | 3151260 - 3151922 | 24291.8 |
| histidine kinase | AO275_24635 | Not Available | Negative | 3151919 - 3152809 | 33227.2 |
| hypothetical protein | AO275_24640 | Not Available | Negative | 3153200 - 3153631 | 15777.6 |
| hypothetical protein | AO275_24645 | Not Available | Negative | 3153625 - 3153897 | 9710.32 |
| chemotaxis protein chew | AO275_24650 | Not Available | Positive | 3154210 - 3155139 | 34525.4 |
| molybdenum cofactor sulfurase | AO275_24655 | Not Available | Positive | 3155233 - 3156042 | 30070.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
