Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter | AO275_24560 | Not Available | Negative | 3133254 - 3134450 | 42758.3 |
| transcriptional regulator | AO275_24565 | Not Available | Positive | 3134577 - 3135473 | 32782.8 |
| hypothetical protein | AO275_24570 | Not Available | Negative | 3135525 - 3136946 | 49763.6 |
| acetyltransferase | AO275_24575 | Not Available | Negative | 3136961 - 3137782 | 30615.3 |
| hypothetical protein | AO275_24580 | Not Available | Negative | 3137779 - 3139194 | 51197.8 |
| glycosyl transferase family 1 | AO275_24585 | Not Available | Negative | 3139194 - 3140294 | 41160.4 |
| glycosyl transferase | AO275_24590 | Not Available | Negative | 3140278 - 3141501 | 46100.0 |
| beta-xylosidase | AO275_24595 | Not Available | Negative | 3141504 - 3142817 | 48445.8 |
| glycosyl transferase family 1 | AO275_24600 | Not Available | Negative | 3142819 - 3143997 | 43092.7 |
| lipopolysaccharide biosynthesis protein | AO275_24605 | Not Available | Negative | 3143997 - 3145988 | 74667.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
