Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_24360 | Not Available | Positive | 3091680 - 3092258 | 21335.6 |
| ligand-gated channel | AO275_24365 | Not Available | Negative | 3092302 - 3094368 | 75000.5 |
| acetyltransferase | AO275_24370 | Not Available | Negative | 3094518 - 3094958 | 16085.4 |
| alpha/beta hydrolase | AO275_24375 | Not Available | Negative | 3095052 - 3095996 | 34969.1 |
| gnat family acetyltransferase | AO275_24380 | Not Available | Positive | 3096426 - 3096908 | 18372.2 |
| hypothetical protein | AO275_24385 | Not Available | Positive | 3097481 - 3097759 | 10133.1 |
| pyridine nucleotide-disulfide oxidoreductase | AO275_24390 | Not Available | Positive | 3098477 - 3099874 | 49953.9 |
| 2-dehydropantoate 2-reductase | AO275_24395 | Not Available | Positive | 3099968 - 3100906 | 33499.6 |
| hypothetical protein | AO275_24400 | Not Available | Positive | 3100965 - 3101204 | 8917.68 |
| hypothetical protein | AO275_24405 | Not Available | Negative | 3101287 - 3102126 | 29216.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
