Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_24310 | Not Available | Negative | 3080544 - 3081128 | 20894.9 |
| catalase | AO275_24315 | Not Available | Negative | 3081194 - 3082699 | 55517.2 |
| gnat family acetyltransferase | AO275_24320 | Not Available | Positive | 3083332 - 3084045 | 26561.0 |
| chemotaxis protein | AO275_24325 | Not Available | Positive | 3084228 - 3085868 | 57924.0 |
| hypothetical protein | AO275_24330 | Not Available | Positive | 3086101 - 3086955 | 30181.9 |
| hypothetical protein | AO275_24335 | Not Available | Negative | 3086990 - 3087418 | 15787.0 |
| chemotaxis protein | AO275_24340 | Not Available | Negative | 3087625 - 3089256 | 57848.0 |
| tetr family transcriptional regulator | AO275_24345 | Not Available | Negative | 3089435 - 3090052 | 22945.8 |
| polyribonucleotide nucleotidyltransferase | AO275_24350 | Not Available | Positive | 3090278 - 3090802 | 19460.5 |
| hypothetical protein | AO275_24355 | Not Available | Positive | 3091060 - 3091665 | 22086.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
