Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AO275_24260 | Not Available | Positive | 3070599 - 3071750 | 38982.0 |
| phzf family phenazine biosynthesis protein | AO275_24265 | Not Available | Negative | 3071754 - 3072587 | 29340.8 |
| na(+)-translocating nadh-quinone reductase subunit e | AO275_24270 | Not Available | Negative | 3072701 - 3073183 | 18112.8 |
| transcriptional regulator | AO275_24275 | Not Available | Positive | 3073283 - 3074167 | 32349.6 |
| hypothetical protein | AO275_24280 | Not Available | Positive | 3074288 - 3075430 | 41265.0 |
| hypothetical protein | AO275_24285 | Not Available | Positive | 3075464 - 3075874 | 15401.5 |
| hypothetical protein | AO275_24290 | Not Available | Negative | 3076114 - 3076356 | 8469.96 |
| hypothetical protein | AO275_24295 | Not Available | Positive | 3076805 - 3077014 | 8364.89 |
| chemotaxis protein chey | AO275_24300 | Not Available | Positive | 3077195 - 3079288 | 78031.0 |
| mn-containing catalase | AO275_24305 | Not Available | Positive | 3079558 - 3080463 | 32285.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
