Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AO275_24210 | Not Available | Negative | 3060414 - 3061328 | 32473.3 |
| gdp-mannose pyrophosphatase | AO275_24215 | Not Available | Negative | 3061337 - 3061933 | 22666.9 |
| 5'-methylthioadenosine phosphorylase | AO275_24220 | Not Available | Negative | 3061930 - 3062838 | 32426.9 |
| dihydrorhizobitoxine desaturase | AO275_24225 | Not Available | Negative | 3062835 - 3063950 | 42525.5 |
| phosphoglycolate phosphatase | AO275_24230 | Not Available | Negative | 3063953 - 3064651 | 25476.3 |
| fad-dependent oxidoreductase | AO275_24235 | Not Available | Negative | 3064648 - 3066018 | 50523.4 |
| aminotransferase | AO275_24240 | Not Available | Negative | 3065999 - 3067087 | 40064.0 |
| dna mismatch repair protein mutt | AO275_24245 | Not Available | Negative | 3067084 - 3067596 | 19814.7 |
| aspartate aminotransferase | AO275_24250 | Not Available | Negative | 3067597 - 3068712 | 40264.8 |
| dehydrogenase | AO275_24255 | Not Available | Negative | 3068753 - 3069769 | 37409.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
