Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class c beta-lactamase | AO275_24160 | Not Available | Negative | 3049507 - 3050685 | 43438.0 |
| lysr family transcriptional regulator | AO275_24165 | Not Available | Negative | 3050778 - 3051671 | 32414.4 |
| citrate transporter | AO275_24170 | Not Available | Positive | 3051825 - 3053117 | 45750.4 |
| abc transporter substrate-binding protein | AO275_24175 | Not Available | Positive | 3053118 - 3054479 | 48173.6 |
| beta-lactamase | AO275_24180 | Not Available | Positive | 3054476 - 3054799 | 11490.8 |
| sulfate transporter | AO275_24185 | Not Available | Positive | 3054924 - 3056369 | 51422.8 |
| atpase | AO275_24190 | Not Available | Positive | 3056417 - 3057532 | 42260.7 |
| chemotaxis protein | AO275_24195 | Not Available | Negative | 3057536 - 3058420 | 32768.5 |
| haloacid dehalogenase | AO275_24200 | Not Available | Negative | 3058525 - 3059181 | 23722.7 |
| mfs transporter | AO275_24205 | Not Available | Negative | 3059188 - 3060417 | 42758.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
