Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flhb | AO275_24010 | Not Available | Negative | 3021740 - 3022063 | 11975.1 |
| flagellar hook-length control protein flik | AO275_24015 | Not Available | Negative | 3022063 - 3023682 | 57565.1 |
| cytochrome c biogenesis protein ccma | AO275_24020 | Not Available | Positive | 3023872 - 3024513 | 22845.8 |
| heme transporter | AO275_24025 | Not Available | Positive | 3024510 - 3025181 | 23310.1 |
| heme abc transporter permease | AO275_24030 | Not Available | Positive | 3025237 - 3026031 | 29345.5 |
| heme exporter protein ccmd | AO275_24035 | Not Available | Positive | 3026028 - 3026204 | 6750.34 |
| cytochrome c biogenesis protein ccme | AO275_24040 | Not Available | Positive | 3026201 - 3026668 | 16672.3 |
| cytochrome c biogenesis protein ccmf | AO275_24045 | Not Available | Positive | 3026672 - 3028645 | 71643.8 |
| thiol:disulfide interchange protein | AO275_24050 | Not Available | Positive | 3028642 - 3029178 | 20222.6 |
| cytochrome c | AO275_24055 | Not Available | Positive | 3029175 - 3029651 | 17913.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
