Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase | AO275_23910 | Not Available | Negative | 2994258 - 2996627 | 86348.0 |
| fad-binding molybdopterin dehydrogenase | AO275_23915 | Not Available | Negative | 2996620 - 2998074 | 53475.1 |
| gntr family transcriptional regulator | AO275_23920 | Not Available | Positive | 2998348 - 2999007 | 24628.8 |
| chromosome segregation protein smc | AO275_23925 | Not Available | Positive | 2999012 - 3002500 | 131632.0 |
| cell division protein zipa | AO275_23930 | Not Available | Positive | 3002753 - 3003628 | 32802.0 |
| aromatic ring-opening dioxygenase liga | AO275_23935 | Not Available | Positive | 3003752 - 3006100 | 86035.2 |
| dna polymerase iii subunit gamma/tau | AO275_23940 | Not Available | Positive | 3006330 - 3007496 | 43888.7 |
| gnat family acetyltransferase | AO275_23945 | Not Available | Negative | 3007539 - 3008027 | 18024.9 |
| hypothetical protein | AO275_23950 | Not Available | Positive | 3008048 - 3008401 | 12997.1 |
| hypothetical protein | AO275_23955 | Not Available | Negative | 3008487 - 3009317 | 31824.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
