Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | AO275_23860 | Not Available | Positive | 2982859 - 2983842 | 36285.6 |
| acetylornithine aminotransferase | AO275_23865 | Not Available | Positive | 2984235 - 2985452 | 43380.9 |
| arginine n-succinyltransferase | AO275_23870 | Not Available | Positive | 2985585 - 2986628 | 37687.5 |
| arginine n-succinyltransferase | AO275_23875 | Not Available | Positive | 2986691 - 2987716 | 37498.9 |
| succinylglutamate-semialdehyde dehydrogenase | AO275_23880 | Not Available | Positive | 2987716 - 2989182 | 51726.5 |
| succinylarginine dihydrolase | AO275_23885 | Not Available | Positive | 2989232 - 2990578 | 48993.0 |
| topoisomerase ii | AO275_23890 | Not Available | Positive | 2990638 - 2990925 | 10473.2 |
| succinylglutamate desuccinylase | AO275_23895 | Not Available | Positive | 2990947 - 2991960 | 37501.1 |
| guanine deaminase | AO275_23900 | Not Available | Negative | 2992034 - 2993347 | 47977.1 |
| molybdenum cofactor sulfurylase | AO275_23905 | Not Available | Negative | 2993355 - 2994194 | 30292.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
