Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pterin-4-alpha-carbinolamine dehydratase | AO275_23810 | Not Available | Negative | 2972229 - 2972585 | 13332.9 |
| phenylalanine 4-monooxygenase | AO275_23815 | Not Available | Negative | 2972626 - 2973423 | 30224.5 |
| aaa family atpase | AO275_23820 | Not Available | Positive | 2973694 - 2975253 | 57033.2 |
| topoisomerase ii | AO275_23825 | Not Available | Negative | 2975363 - 2975629 | 9537.47 |
| acetyl-coa synthetase | AO275_23830 | Not Available | Positive | 2975968 - 2977923 | 71573.2 |
| abc transporter substrate-binding protein | AO275_23835 | Not Available | Positive | 2978576 - 2979352 | 27994.7 |
| abc transporter | AO275_23840 | Not Available | Positive | 2979438 - 2980127 | 24951.3 |
| amino acid abc transporter permease | AO275_23845 | Not Available | Positive | 2980124 - 2980822 | 26091.7 |
| peptidase m14 | AO275_23850 | Not Available | Positive | 2980824 - 2981936 | 40408.6 |
| amino acid transporter | AO275_23855 | Not Available | Positive | 2981959 - 2982723 | 27953.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
