Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate hydrolase | AO275_23760 | Not Available | Negative | 2964106 - 2964630 | 19463.1 |
| allantoicase | AO275_23765 | Not Available | Negative | 2964782 - 2965777 | 36618.0 |
| ohcu decarboxylase | AO275_23770 | Not Available | Negative | 2965794 - 2966333 | 19716.4 |
| allantoinase | AO275_23775 | Not Available | Negative | 2966330 - 2967259 | 35755.3 |
| hypothetical protein | AO275_23780 | Not Available | Negative | 2967297 - 2967524 | 8778.86 |
| 5-hydroxyisourate hydrolase | AO275_23785 | Not Available | Positive | 2967652 - 2968005 | 12890.3 |
| gntr family transcriptional regulator | AO275_23790 | Not Available | Positive | 2968143 - 2968895 | 27727.0 |
| mfs transporter | AO275_23795 | Not Available | Negative | 2968908 - 2970119 | 41664.1 |
| hypothetical protein | AO275_23800 | Not Available | Negative | 2970312 - 2970491 | 6332.56 |
| aromatic amino acid aminotransferase | AO275_23805 | Not Available | Negative | 2971033 - 2972229 | 43473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
