Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AO275_23710 | Not Available | Positive | 2952601 - 2953455 | 30835.4 |
| histidine kinase | AO275_23715 | Not Available | Negative | 2953481 - 2955655 | 79506.4 |
| 1-aminocyclopropane-1-carboxylate deaminase | AO275_23720 | Not Available | Negative | 2955896 - 2956912 | 36856.1 |
| asnc family transcriptional regulator | AO275_23725 | Not Available | Positive | 2957084 - 2957590 | 18725.0 |
| hypothetical protein | AO275_23730 | Not Available | Positive | 2957713 - 2958528 | 30351.2 |
| lysine transporter lyse | AO275_23735 | Not Available | Negative | 2958466 - 2959116 | 23446.2 |
| hypothetical protein | AO275_23740 | Not Available | Negative | 2959117 - 2960406 | 48159.6 |
| hypothetical protein | AO275_23745 | Not Available | Positive | 2960605 - 2961513 | 31285.1 |
| hypothetical protein | AO275_23750 | Not Available | Negative | 2961631 - 2962416 | 29712.5 |
| hypothetical protein | AO275_23755 | Not Available | Negative | 2962794 - 2964077 | 46798.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
