Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | AO275_16370 | Not Available | Positive | 172439 - 173371 | 33770.7 |
| amino acid abc transporter permease | AO275_16375 | Not Available | Positive | 173485 - 174231 | 27600.2 |
| amino acid abc transporter permease | AO275_16380 | Not Available | Positive | 174231 - 174896 | 24184.6 |
| amino acid abc transporter atp-binding protein | AO275_16385 | Not Available | Positive | 174893 - 175627 | 26868.7 |
| histidine kinase | AO275_16390 | Not Available | Positive | 175687 - 177603 | 71011.0 |
| fis family transcriptional regulator | AO275_16395 | Not Available | Positive | 177614 - 178942 | 49036.7 |
| hypothetical protein | AO275_16400 | Not Available | Positive | 178989 - 179327 | 12256.6 |
| disulfide bond formation protein dsba | AO275_16405 | Not Available | Negative | 179345 - 179992 | 23954.0 |
| alpha/beta hydrolase | AO275_16410 | Not Available | Negative | 180063 - 181055 | 35779.9 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | AO275_16415 | Not Available | Negative | 181187 - 181888 | 26236.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
