Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein | AO275_23560 | Not Available | Negative | 2918242 - 2918988 | 28018.9 |
| rnd transporter | AO275_23565 | Not Available | Negative | 2919145 - 2920602 | 51341.7 |
| acrr family transcriptional regulator | AO275_23570 | Not Available | Positive | 2920690 - 2921304 | 22752.3 |
| hemolysin secretion protein d | AO275_23575 | Not Available | Positive | 2921380 - 2922486 | 37931.3 |
| multidrug transporter | AO275_23580 | Not Available | Positive | 2922483 - 2925593 | 113012.0 |
| 3-oxoacyl-acp synthase | AO275_23585 | Not Available | Positive | 2925596 - 2926876 | 43980.3 |
| multidrug transporter cfla | AO275_23590 | Not Available | Positive | 2927010 - 2928221 | 41195.7 |
| chemotaxis protein | AO275_23595 | Not Available | Positive | 2928475 - 2930094 | 58048.1 |
| hypothetical protein | AO275_23600 | Not Available | Negative | 2930210 - 2930587 | 14499.8 |
| hypothetical protein | AO275_23605 | Not Available | Negative | 2930709 - 2930906 | 7240.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
