Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_23505 | Not Available | Positive | 2906085 - 2907317 | 42947.8 |
| hypothetical protein | AO275_23510 | Not Available | Positive | 2907336 - 2908106 | 26879.2 |
| hypothetical protein | AO275_23515 | Not Available | Positive | 2908103 - 2908897 | 28749.3 |
| allophanate hydrolase | AO275_23520 | Not Available | Positive | 2908907 - 2910508 | 56335.0 |
| acetyl/propionyl-coa carboxylase subuit alpha | AO275_23525 | Not Available | Positive | 2910505 - 2912241 | 61977.5 |
| porin | AO275_23530 | Not Available | Positive | 2912392 - 2913633 | 45365.0 |
| sam-dependent methyltransferase | AO275_23535 | Not Available | Positive | 2913929 - 2914624 | 25759.1 |
| multidrug dmt transporter permease | AO275_23540 | Not Available | Negative | 2914621 - 2915463 | 29185.4 |
| transcriptional regulator | AO275_23545 | Not Available | Positive | 2915599 - 2916486 | 32537.4 |
| alcohol dehydrogenase | AO275_23555 | Not Available | Negative | 2917211 - 2918143 | 32854.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
