Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_23455 | Not Available | Negative | 2897767 - 2898180 | 15548.0 |
| hypothetical protein | AO275_23460 | Not Available | Positive | 2898388 - 2898702 | 11586.7 |
| acetyltransferase | AO275_23465 | Not Available | Positive | 2898868 - 2899314 | 16369.9 |
| gcn5 family acetyltransferase | AO275_23470 | Not Available | Positive | 2899602 - 2900084 | 17874.2 |
| hypothetical protein | AO275_23475 | Not Available | Negative | 2900847 - 2901155 | 11319.5 |
| hypothetical protein | AO275_23480 | Not Available | Positive | 2901401 - 2902189 | 29560.7 |
| glutathione s-transferase | AO275_23485 | Not Available | Negative | 2902338 - 2903039 | 26121.6 |
| transcriptional regulator | AO275_23490 | Not Available | Positive | 2903187 - 2903762 | 20706.5 |
| chromate transporter | AO275_23495 | Not Available | Negative | 2903759 - 2905117 | 48819.5 |
| gntr family transcriptional regulator | AO275_23500 | Not Available | Negative | 2905163 - 2905762 | 22170.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
