Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photolyase | AO275_23355 | Not Available | Negative | 2845099 - 2846637 | 58392.6 |
| nudix hydrolase | AO275_23360 | Not Available | Negative | 2846675 - 2847214 | 19178.3 |
| adp-ribose pyrophosphatase | AO275_23365 | Not Available | Negative | 2847247 - 2847960 | 26843.2 |
| cytidyltransferase | AO275_23370 | Not Available | Negative | 2847962 - 2848507 | 19826.8 |
| amidase | AO275_23375 | Not Available | Positive | 2848718 - 2849359 | 23046.8 |
| nicotinate phosphoribosyltransferase | AO275_23380 | Not Available | Positive | 2849376 - 2850581 | 45926.6 |
| nad synthetase | AO275_23385 | Not Available | Positive | 2850589 - 2851425 | 29048.7 |
| aspartate carbamoyltransferase | AO275_23390 | Not Available | Positive | 2851586 - 2852857 | 46817.9 |
| ice nucleation protein | AO275_23395 | Not Available | Positive | 2853681 - 2857517 | 125591.0 |
| tonb-dependent receptor | AO275_23400 | Not Available | Negative | 2857818 - 2859980 | 79101.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
