Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin dehydrogenase | AO275_23305 | Not Available | Negative | 2834858 - 2835808 | 33294.0 |
| ferredoxin | AO275_23310 | Not Available | Negative | 2835805 - 2836467 | 23260.6 |
| tetr family transcriptional regulator | AO275_23315 | Not Available | Negative | 2836620 - 2837222 | 21990.3 |
| oxidoreductase | AO275_23320 | Not Available | Positive | 2837318 - 2838076 | 26832.3 |
| chemotaxis protein | AO275_23325 | Not Available | Positive | 2838808 - 2840433 | 58087.3 |
| sorbosone dehydrogenase | AO275_23330 | Not Available | Negative | 2840635 - 2841927 | 46121.5 |
| hypothetical protein | AO275_23335 | Not Available | Negative | 2841924 - 2842352 | 15371.2 |
| hypothetical protein | AO275_23340 | Not Available | Positive | 2842789 - 2843367 | 21698.0 |
| hypothetical protein | AO275_23345 | Not Available | Negative | 2843375 - 2843746 | 13012.6 |
| nad-dependent dehydratase | AO275_23350 | Not Available | Negative | 2843813 - 2844874 | 38993.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
