Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclease pin | AO275_23255 | Not Available | Negative | 2821415 - 2823031 | 57061.1 |
| magnesium transporter cora | AO275_23260 | Not Available | Negative | 2823166 - 2824185 | 38386.2 |
| hypothetical protein | AO275_23265 | Not Available | Positive | 2824526 - 2826097 | 54505.2 |
| oxidoreductase | AO275_23270 | Not Available | Negative | 2826098 - 2826919 | 30475.6 |
| chemotaxis protein | AO275_23275 | Not Available | Negative | 2827000 - 2828631 | 59084.5 |
| tetr family transcriptional regulator | AO275_23280 | Not Available | Negative | 2829019 - 2829627 | 22679.1 |
| cupin | AO275_23285 | Not Available | Positive | 2830425 - 2830826 | 14305.9 |
| 4-carboxymuconolactone decarboxylase | AO275_23290 | Not Available | Positive | 2830823 - 2831614 | 28205.7 |
| lysr family transcriptional regulator | AO275_23295 | Not Available | Negative | 2831602 - 2832537 | 34205.5 |
| xanthine dehydrogenase | AO275_23300 | Not Available | Negative | 2832565 - 2834781 | 78622.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
