Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin | AO275_16320 | Not Available | Negative | 160513 - 160839 | 11678.1 |
| dehydrogenase | AO275_16325 | Not Available | Negative | 160928 - 163036 | 76639.8 |
| hypothetical protein | AO275_16330 | Not Available | Negative | 163170 - 163463 | 10929.2 |
| ornithine carbamoyltransferase | AO275_16335 | Not Available | Positive | 163903 - 164823 | 34169.3 |
| iron abc transporter atp-binding protein | AO275_16340 | Not Available | Positive | 164820 - 165896 | 38961.7 |
| hypothetical protein | AO275_16345 | Not Available | Negative | 165906 - 166376 | 16691.2 |
| glycerol uptake facilitator glpf | AO275_16350 | Not Available | Positive | 166728 - 167594 | 30266.5 |
| glycerol kinase | AO275_16355 | Not Available | Positive | 167625 - 169130 | 55842.3 |
| deor family transcriptional regulator | AO275_16360 | Not Available | Positive | 169229 - 169984 | 27684.3 |
| glycerol-3-phosphate dehydrogenase | AO275_16365 | Not Available | Positive | 170401 - 171942 | 57122.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
