Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2,3-diacylglucosamine hydrolase | AO275_23055 | Not Available | Negative | 2771868 - 2772629 | 28648.0 |
| peptidylprolyl isomerase | AO275_23060 | Not Available | Negative | 2772626 - 2773129 | 18317.7 |
| glutamine--trna ligase | AO275_23065 | Not Available | Positive | 2773337 - 2775031 | 64497.0 |
| cysteine--trna ligase | AO275_23070 | Not Available | Positive | 2775055 - 2776437 | 51362.0 |
| fis family transcriptional regulator | AO275_23075 | Not Available | Negative | 2776633 - 2778492 | 68663.1 |
| abc transporter atp-binding protein | AO275_23080 | Not Available | Positive | 2778788 - 2779882 | 40611.1 |
| abc transporter atp-binding protein | AO275_23085 | Not Available | Positive | 2779882 - 2780991 | 41334.0 |
| abc transporter permease | AO275_23090 | Not Available | Positive | 2780988 - 2781857 | 32691.3 |
| sugar abc transporter permease | AO275_23095 | Not Available | Positive | 2781868 - 2782668 | 29839.1 |
| hypothetical protein | AO275_23100 | Not Available | Positive | 2782680 - 2782952 | 10029.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
