Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase | AO275_23005 | Not Available | Negative | 2759403 - 2759834 | 15787.2 |
| dna-binding protein | AO275_23010 | Not Available | Positive | 2760033 - 2761439 | 51817.7 |
| transporter | AO275_23015 | Not Available | Negative | 2761450 - 2762346 | 30830.6 |
| gntr family transcriptional regulator | AO275_23020 | Not Available | Positive | 2762441 - 2763772 | 48089.6 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | AO275_23025 | Not Available | Negative | 2763970 - 2766570 | 93958.9 |
| fe-s protein | AO275_23030 | Not Available | Positive | 2766972 - 2767442 | 18375.3 |
| trna hydroxylase | AO275_23035 | Not Available | Positive | 2767525 - 2768136 | 23314.0 |
| marr family transcriptional regulator | AO275_23040 | Not Available | Positive | 2768296 - 2768781 | 18036.8 |
| hemolysin d | AO275_23045 | Not Available | Positive | 2768857 - 2770074 | 43337.2 |
| multidrug resistance protein b | AO275_23050 | Not Available | Positive | 2770135 - 2771673 | 55446.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
