Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_22955 | Not Available | Negative | 2745999 - 2747717 | 63793.7 |
| batb protein | AO275_22960 | Not Available | Negative | 2747714 - 2748772 | 39106.7 |
| hypothetical protein | AO275_22965 | Not Available | Negative | 2748765 - 2749259 | 18307.4 |
| hypothetical protein | AO275_22970 | Not Available | Negative | 2749256 - 2750200 | 36100.8 |
| aaa family atpase | AO275_22975 | Not Available | Negative | 2750205 - 2751164 | 35476.9 |
| 2-pyrone-4,6-dicarboxylate hydrolase | AO275_22980 | Not Available | Negative | 2751402 - 2752151 | 26860.2 |
| hypothetical protein | AO275_22985 | Not Available | Negative | 2752190 - 2752549 | 13386.7 |
| nad-glutamate dehydrogenase | AO275_22990 | Not Available | Positive | 2752931 - 2757787 | 182004.0 |
| hypothetical protein | AO275_22995 | Not Available | Negative | 2757898 - 2758464 | 19690.6 |
| thioredoxin | AO275_23000 | Not Available | Positive | 2758830 - 2759375 | 19788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
