Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AO275_22905 | Not Available | Positive | 2733380 - 2734693 | 47833.7 |
| fah family protein | AO275_22910 | Not Available | Positive | 2734727 - 2735719 | 36220.7 |
| hypothetical protein | AO275_22915 | Not Available | Positive | 2735976 - 2736260 | 10430.0 |
| hypothetical protein | AO275_22920 | Not Available | Positive | 2736373 - 2736915 | 19766.1 |
| 3-carboxymuconate cyclase | AO275_22925 | Not Available | Positive | 2737024 - 2738196 | 42747.9 |
| hypothetical protein | AO275_22930 | Not Available | Positive | 2738384 - 2738566 | 6376.45 |
| glutathione s-transferase | AO275_22935 | Not Available | Negative | 2738813 - 2739412 | 23271.0 |
| chromosome segregation protein smc | AO275_22940 | Not Available | Negative | 2739409 - 2743056 | 137254.0 |
| exonuclease sbcd | AO275_22945 | Not Available | Negative | 2743053 - 2744297 | 45995.8 |
| protein batd | AO275_22950 | Not Available | Negative | 2744338 - 2746002 | 60762.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
