Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease | AO275_22855 | Not Available | Positive | 2721920 - 2722486 | 20237.5 |
| potassium channel protein | AO275_22860 | Not Available | Positive | 2722560 - 2723585 | 36770.3 |
| hypothetical protein | AO275_22865 | Not Available | Positive | 2723582 - 2724244 | 24266.7 |
| hypothetical protein | AO275_22870 | Not Available | Positive | 2724258 - 2724683 | 14786.5 |
| hypothetical protein | AO275_22875 | Not Available | Positive | 2724711 - 2725520 | 27637.7 |
| hypothetical protein | AO275_22880 | Not Available | Positive | 2725533 - 2726690 | 43919.8 |
| hypothetical protein | AO275_22885 | Not Available | Positive | 2726947 - 2727951 | 35432.6 |
| rnd transporter | AO275_22890 | Not Available | Positive | 2727979 - 2730369 | 87640.7 |
| gntr family transcriptional regulator | AO275_22895 | Not Available | Negative | 2730588 - 2731301 | 26683.2 |
| dihydroxy-acid dehydratase | AO275_22900 | Not Available | Negative | 2731422 - 2733164 | 62169.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
