Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt chelatase | AO275_22805 | Not Available | Negative | 2711276 - 2712259 | 37370.4 |
| diguanylate cyclase | AO275_22810 | Not Available | Positive | 2712550 - 2713635 | 39676.7 |
| nad kinase | AO275_22815 | Not Available | Positive | 2713732 - 2714622 | 32227.3 |
| serine/threonine protein phosphatase | AO275_22820 | Not Available | Positive | 2714622 - 2715593 | 36663.9 |
| peptidase s54 | AO275_22825 | Not Available | Positive | 2715590 - 2716462 | 31856.5 |
| hypothetical protein | AO275_22830 | Not Available | Positive | 2716491 - 2716751 | 9710.52 |
| hypothetical protein | AO275_22835 | Not Available | Positive | 2716748 - 2717581 | 30884.3 |
| aminopeptidase | AO275_22840 | Not Available | Positive | 2717594 - 2720260 | 99519.6 |
| hypothetical protein | AO275_22845 | Not Available | Positive | 2720502 - 2721155 | 24062.8 |
| phage shock protein a | AO275_22850 | Not Available | Positive | 2721182 - 2721889 | 25107.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
