Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_25105 | Not Available | Positive | 2695810 - 2697345 | 55216.8 |
| hypothetical protein | AO275_06775 | Not Available | Positive | 2698049 - 2698561 | 18996.2 |
| transposase | AO275_13975 | Not Available | Negative | 2699662 - 2700021 | 14070.2 |
| arac family transcriptional regulator | AO275_22770 | Not Available | Negative | 2701634 - 2702674 | 38687.1 |
| carbon-nitrogen hydrolase | AO275_22775 | Not Available | Negative | 2702677 - 2703819 | 42562.6 |
| 2,4-dienoyl-coa reductase | AO275_22780 | Not Available | Positive | 2704044 - 2706083 | 73145.9 |
| 1-aminocyclopropane-1-carboxylate deaminase | AO275_22785 | Not Available | Positive | 2706135 - 2707070 | 33532.3 |
| mfs transporter | AO275_22790 | Not Available | Positive | 2707192 - 2708538 | 46906.7 |
| fosmidomycin resistance protein | AO275_22795 | Not Available | Positive | 2708822 - 2710030 | 42549.9 |
| arsenic transporter | AO275_22800 | Not Available | Positive | 2710030 - 2711310 | 45631.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
