Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase | AO275_22680 | Not Available | Positive | 2650988 - 2652346 | 48988.9 |
| nadh dehydrogenase | AO275_22685 | Not Available | Positive | 2652486 - 2655203 | 98534.8 |
| nadh:ubiquinone oxidoreductase | AO275_22690 | Not Available | Positive | 2655200 - 2656207 | 37459.5 |
| nadh dehydrogenase | AO275_22695 | Not Available | Positive | 2656219 - 2656767 | 20532.7 |
| nadh dehydrogenase | AO275_22700 | Not Available | Positive | 2656778 - 2657287 | 17983.6 |
| nadh-quinone oxidoreductase subunit k | AO275_22705 | Not Available | Positive | 2657284 - 2657592 | 11005.0 |
| nadh-quinone oxidoreductase subunit l | AO275_22710 | Not Available | Positive | 2657589 - 2659442 | 66546.5 |
| nadh:ubiquinone oxidoreductase subunit m | AO275_22715 | Not Available | Positive | 2659482 - 2661014 | 55647.7 |
| nadh:ubiquinone oxidoreductase subunit n | AO275_22720 | Not Available | Positive | 2661022 - 2662491 | 51987.5 |
| hypothetical protein | AO275_22725 | Not Available | Negative | 2662551 - 2663615 | 38933.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
