Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AO275_22230 | Not Available | Positive | 2556707 - 2557921 | 42667.2 |
| hypothetical protein | AO275_22235 | Not Available | Positive | 2558241 - 2559002 | 27936.2 |
| phospholipase | AO275_22240 | Not Available | Negative | 2559177 - 2559896 | 26180.3 |
| type ii secretion system protein gspd | AO275_22245 | Not Available | Negative | 2559972 - 2562308 | 82417.6 |
| general secretion pathway protein gspn | AO275_22250 | Not Available | Negative | 2562308 - 2562838 | 18606.3 |
| general secretion pathway protein gspm | AO275_22255 | Not Available | Negative | 2562835 - 2563446 | 22301.6 |
| general secretion pathway protein gspl | AO275_22260 | Not Available | Negative | 2563427 - 2564527 | 40842.9 |
| general secretion pathway protein gspk | AO275_22265 | Not Available | Negative | 2564530 - 2565258 | 26244.0 |
| general secretion pathway protein gspj | AO275_22270 | Not Available | Negative | 2565255 - 2565887 | 22439.1 |
| general secretion pathway protein gspi | AO275_22275 | Not Available | Negative | 2565884 - 2566255 | 13340.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
