Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_22180 | Not Available | Positive | 2542636 - 2543289 | 23761.2 |
| hydroxyacid dehydrogenase | AO275_22185 | Not Available | Positive | 2543331 - 2544287 | 34995.2 |
| tonb-dependent receptor | AO275_22190 | Not Available | Negative | 2544305 - 2546428 | 77793.9 |
| hypothetical protein | AO275_22195 | Not Available | Positive | 2546705 - 2547640 | 34360.1 |
| transcriptional regulator | AO275_22200 | Not Available | Positive | 2547727 - 2548410 | 25015.5 |
| histidine kinase | AO275_22205 | Not Available | Positive | 2548388 - 2549785 | 51396.3 |
| mfs transporter | AO275_22210 | Not Available | Positive | 2550259 - 2551122 | 32205.3 |
| rnd transporter | AO275_22215 | Not Available | Positive | 2551222 - 2552406 | 42650.9 |
| hemolysin d | AO275_22220 | Not Available | Positive | 2552403 - 2553503 | 40317.2 |
| acr family transporter | AO275_22225 | Not Available | Positive | 2553500 - 2556544 | 111516.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
