Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_22130 | Not Available | Positive | 2529776 - 2530864 | 37883.0 |
| sugar isomerase | AO275_22135 | Not Available | Negative | 2530881 - 2532125 | 46155.6 |
| chemotaxis protein | AO275_22140 | Not Available | Negative | 2532245 - 2533870 | 58128.0 |
| alanine acetyltransferase | AO275_22145 | Not Available | Positive | 2534084 - 2534566 | 18017.2 |
| glycerate kinase | AO275_22150 | Not Available | Negative | 2534796 - 2535935 | 39183.8 |
| cdar family transcriptional regulator | AO275_22155 | Not Available | Negative | 2536046 - 2537137 | 41136.6 |
| lysophospholipase | AO275_22160 | Not Available | Positive | 2537495 - 2538595 | 42046.4 |
| gntr family transcriptional regulator | AO275_22165 | Not Available | Negative | 2538592 - 2539305 | 26319.6 |
| mfs transporter | AO275_22170 | Not Available | Positive | 2539787 - 2541112 | 47906.2 |
| glucarate dehydratase | AO275_22175 | Not Available | Positive | 2541150 - 2542502 | 49495.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
