Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter atp-binding protein | AO275_22080 | Not Available | Negative | 2520866 - 2521645 | 29318.5 |
| phosphate abc transporter permease | AO275_22085 | Not Available | Negative | 2521645 - 2522529 | 31521.6 |
| phosphate abc transporter permease | AO275_22090 | Not Available | Negative | 2522526 - 2523521 | 35668.3 |
| phosphate abc transporter substrate-binding protein | AO275_22095 | Not Available | Negative | 2523604 - 2524623 | 36185.0 |
| hypothetical protein | AO275_22100 | Not Available | Positive | 2525145 - 2525441 | 10022.7 |
| hypothetical protein | AO275_22105 | Not Available | Positive | 2525557 - 2525865 | 9981.25 |
| nuclease | AO275_22110 | Not Available | Negative | 2525950 - 2527650 | 65444.5 |
| nucleoside 2-deoxyribosyltransferase | AO275_22115 | Not Available | Positive | 2527821 - 2528318 | 18005.4 |
| hypothetical protein | AO275_22120 | Not Available | Negative | 2528409 - 2528624 | 7693.69 |
| lysr family transcriptional regulator | AO275_22125 | Not Available | Negative | 2528731 - 2529636 | 33320.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
