Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-phosphorus lyase complex subunit phni | AO275_22025 | Not Available | Negative | 2509653 - 2510732 | 39771.4 |
| phosphonate c-p lyase system protein phng | AO275_22035 | Not Available | Negative | 2511339 - 2511764 | 15559.6 |
| phosphonate metabolism transcriptional regulator phnf | AO275_22040 | Not Available | Negative | 2511839 - 2512543 | 26425.8 |
| phosphonate abc transporter permease | AO275_22045 | Not Available | Negative | 2512581 - 2513369 | 28857.7 |
| phosphonate abc transporter substrate-binding protein | AO275_22050 | Not Available | Negative | 2513431 - 2514438 | 36923.9 |
| phosphonate/organophosphate ester transporter subunit | AO275_22055 | Not Available | Negative | 2514507 - 2515340 | 30200.7 |
| chemotaxis protein | AO275_22060 | Not Available | Negative | 2515534 - 2517423 | 67380.2 |
| histidine kinase | AO275_22065 | Not Available | Positive | 2517698 - 2518525 | 29296.3 |
| alpha/beta hydrolase | AO275_22070 | Not Available | Negative | 2518696 - 2519694 | 36666.4 |
| lysr family transcriptional regulator | AO275_22075 | Not Available | Positive | 2519936 - 2520865 | 34229.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
