Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_21970 | Not Available | Positive | 2496860 - 2498287 | 51427.9 |
| peptidase m20 | AO275_21975 | Not Available | Positive | 2498284 - 2499432 | 39797.4 |
| amidase | AO275_21980 | Not Available | Positive | 2499652 - 2501175 | 54257.0 |
| transporter | AO275_21985 | Not Available | Positive | 2501290 - 2502192 | 31840.5 |
| phosphonate metabolism protein phnp | AO275_21995 | Not Available | Negative | 2504749 - 2505531 | 28704.7 |
| ribose-phosphate pyrophosphokinase | AO275_22000 | Not Available | Negative | 2505522 - 2506088 | 20947.0 |
| phosphonate metabolism protein phnm | AO275_22005 | Not Available | Negative | 2506088 - 2507233 | 41232.4 |
| phosphonate abc transporter atp-binding protein | AO275_22010 | Not Available | Negative | 2507227 - 2507943 | 26346.0 |
| phosphonate c-p lyase system protein phnk | AO275_22015 | Not Available | Negative | 2507966 - 2508787 | 29973.1 |
| carbon-phosphorus lyase | AO275_22020 | Not Available | Negative | 2508784 - 2509656 | 32658.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
