Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AO275_21870 | Not Available | Negative | 2474738 - 2476549 | 67317.6 |
| calpastatin | AO275_21875 | Not Available | Positive | 2476641 - 2477066 | 16236.5 |
| hypothetical protein | AO275_21880 | Not Available | Negative | 2477143 - 2478216 | 39460.3 |
| glutaminase a | AO275_21885 | Not Available | Negative | 2478298 - 2479206 | 32767.9 |
| nitrate abc transporter substrate-binding protein | AO275_21890 | Not Available | Negative | 2479261 - 2480268 | 36300.1 |
| aldolase | AO275_21895 | Not Available | Negative | 2480301 - 2481116 | 29434.9 |
| aliphatic sulfonate abc transporter substrate-binding protein | AO275_21900 | Not Available | Positive | 2481319 - 2482296 | 35748.6 |
| nitrate abc transporter substrate-binding protein | AO275_21905 | Not Available | Positive | 2482406 - 2483425 | 37445.6 |
| hypothetical protein | AO275_21910 | Not Available | Positive | 2483521 - 2484060 | 19166.1 |
| tonb-dependent receptor | AO275_21915 | Not Available | Positive | 2484264 - 2486384 | 77990.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
