Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_21820 | Not Available | Negative | 2462651 - 2462875 | 8685.33 |
| transcriptional regulator | AO275_21825 | Not Available | Negative | 2462989 - 2464542 | 57305.1 |
| hypothetical protein | AO275_21830 | Not Available | Positive | 2464900 - 2466351 | 54002.6 |
| fad-linked oxidase | AO275_21835 | Not Available | Positive | 2466348 - 2467664 | 48665.4 |
| short-chain dehydrogenase | AO275_21840 | Not Available | Positive | 2467661 - 2468401 | 26594.7 |
| hypothetical protein | AO275_21845 | Not Available | Positive | 2468398 - 2469357 | 34233.8 |
| hypothetical protein | AO275_21850 | Not Available | Positive | 2469424 - 2470854 | 52298.6 |
| glucoamylase | AO275_21855 | Not Available | Negative | 2470880 - 2472706 | 69135.7 |
| sugar dehydrogenase | AO275_21860 | Not Available | Negative | 2472699 - 2473499 | 28321.9 |
| aldo/keto reductase | AO275_21865 | Not Available | Negative | 2473581 - 2474618 | 38313.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
