Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone oxidoreductase | AO275_21770 | Not Available | Positive | 2453994 - 2454851 | 30069.5 |
| hypothetical protein | AO275_21775 | Not Available | Positive | 2454947 - 2455255 | 11372.7 |
| arac family transcriptional regulator | AO275_21780 | Not Available | Positive | 2455380 - 2456201 | 30818.4 |
| lysine transporter lyse | AO275_21785 | Not Available | Negative | 2456212 - 2456796 | 20956.3 |
| hypothetical protein | AO275_21790 | Not Available | Positive | 2456993 - 2457487 | 18002.2 |
| hypothetical protein | AO275_21795 | Not Available | Positive | 2457551 - 2457754 | 7222.16 |
| hypothetical protein | AO275_21800 | Not Available | Positive | 2457877 - 2458074 | 7315.64 |
| mfs transporter | AO275_21805 | Not Available | Negative | 2458071 - 2459519 | 52717.8 |
| divalent metal cation transporter mnth | AO275_21810 | Not Available | Negative | 2459592 - 2460911 | 46442.6 |
| mfs transporter | AO275_21815 | Not Available | Positive | 2461214 - 2462632 | 52118.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
