Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_21715 | Not Available | Negative | 2432858 - 2433175 | 12015.0 |
| hypothetical protein | AO275_21720 | Not Available | Negative | 2433696 - 2434325 | 22769.1 |
| amidohydrolase | AO275_21725 | Not Available | Negative | 2434395 - 2436233 | 68073.1 |
| antibiotic biosynthesis monooxygenase | AO275_21730 | Not Available | Negative | 2436379 - 2437005 | 23372.6 |
| lysr family transcriptional regulator | AO275_21735 | Not Available | Negative | 2437141 - 2438067 | 33919.3 |
| sugar-binding protein | AO275_21745 | Not Available | Negative | 2447208 - 2448011 | 30269.3 |
| aldehyde-activating protein | AO275_21750 | Not Available | Positive | 2448961 - 2449383 | 15352.4 |
| pyruvate dehydrogenase | AO275_21755 | Not Available | Negative | 2449380 - 2451098 | 61389.9 |
| penicillin-binding protein 2 | AO275_21760 | Not Available | Negative | 2451441 - 2453330 | 70331.0 |
| transcriptional regulator | AO275_21765 | Not Available | Negative | 2453466 - 2453906 | 15985.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
