Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repressor | AO275_16165 | Not Available | Negative | 129023 - 129679 | 23692.3 |
| glutathione s-transferase | AO275_16175 | Not Available | Positive | 130150 - 130794 | 24471.0 |
| acyl-homoserine lactone acylase subunit beta | AO275_16180 | Not Available | Positive | 130936 - 133410 | 90204.8 |
| dna ligase-associated dexh box helicase | AO275_16185 | Not Available | Positive | 133697 - 134740 | 38332.0 |
| atp-dependent dna ligase | AO275_16190 | Not Available | Positive | 134737 - 136440 | 63793.2 |
| abc transporter substrate-binding protein | AO275_16195 | Not Available | Positive | 136775 - 137557 | 27860.4 |
| amino acid abc transporter permease | AO275_16200 | Not Available | Positive | 137642 - 138370 | 26661.0 |
| amino acid abc transporter permease | AO275_16205 | Not Available | Positive | 138367 - 139077 | 26647.9 |
| succinylglutamate desuccinylase | AO275_16210 | Not Available | Positive | 139092 - 140210 | 40655.7 |
| amino acid transporter | AO275_16215 | Not Available | Positive | 140220 - 140984 | 28130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
